Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.1■□□□□ 0.01
CCL4P13236 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.1■□□□□ 0.01
CCL4P13236 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 TDH-203ENST00000531764 1110 ntBASIC15.1■□□□□ 0.01
CCL4P13236 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CCL4P13236 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.1■□□□□ 0.01
CCL4P13236 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCL4P13236 AC134407.2-201ENST00000625089 1978 ntBASIC15.1■□□□□ 0.01
CCL4P13236 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.1■□□□□ 0.01
CCL4P13236 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCL4P13236 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCL4P13236 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCL4P13236 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 AC080080.1-201ENST00000625121 2420 ntBASIC15.09■□□□□ 0.01
CCL4P13236 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CCL4P13236 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.09■□□□□ 0.01
CCL4P13236 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.09■□□□□ 0.01
CCL4P13236 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.09■□□□□ 0.01
CCL4P13236 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 MIR5189-201ENST00000577370 114 ntBASIC15.09■□□□□ 0.01
CCL4P13236 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.09■□□□□ 0.01
CCL4P13236 BRI3BPP1-201ENST00000594224 787 ntBASIC15.09■□□□□ 0.01
CCL4P13236 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.09■□□□□ 0.01
CCL4P13236 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.09■□□□□ 0.01
CCL4P13236 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.09■□□□□ 0.01
CCL4P13236 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.09■□□□□ 0.01
CCL4P13236 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CCL4P13236 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL4P13236 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL4P13236 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CCL4P13236 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCL4P13236 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CCL4P13236 AC022211.2-201ENST00000585075 2527 ntBASIC15.08■□□□□ 0.01
CCL4P13236 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCL4P13236 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCL4P13236 PDIA3P1-201ENST00000471856 1510 ntBASIC15.08■□□□□ 0.01
CCL4P13236 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCL4P13236 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCL4P13236 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.08■□□□□ 0
CCL4P13236 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCL4P13236 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.08■□□□□ 0
CCL4P13236 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.08■□□□□ 0
CCL4P13236 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 ACTG1P3-201ENST00000431775 1114 ntBASIC15.08■□□□□ 0
CCL4P13236 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.08■□□□□ 0
CCL4P13236 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.08■□□□□ 0
CCL4P13236 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.08■□□□□ 0
CCL4P13236 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.08■□□□□ 0
CCL4P13236 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.08■□□□□ 0
CCL4P13236 CTBP2P5-201ENST00000454986 1264 ntBASIC15.08■□□□□ 0
CCL4P13236 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.08■□□□□ 0
CCL4P13236 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms