Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 AL139384.1-201ENST00000612143 3047 ntBASIC14.61□□□□□ -0.07
FREM3P0C091 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
FREM3P0C091 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FREM3P0C091 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
FREM3P0C091 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FREM3P0C091 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.6□□□□□ -0.07
FREM3P0C091 IGHV3-42-201ENST00000520410 361 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.6□□□□□ -0.07
FREM3P0C091 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.6□□□□□ -0.07
FREM3P0C091 AC008738.7-201ENST00000609744 511 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FREM3P0C091 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.6□□□□□ -0.07
FREM3P0C091 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
FREM3P0C091 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FREM3P0C091 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.6□□□□□ -0.07
FREM3P0C091 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 AL365203.3-201ENST00000609742 2057 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 HYMAI-201ENST00000635591 3347 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.6□□□□□ -0.07
FREM3P0C091 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FREM3P0C091 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.6□□□□□ -0.07
FREM3P0C091 RPL37AP1-201ENST00000412502 279 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 AC009477.1-201ENST00000452936 217 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.6□□□□□ -0.07
FREM3P0C091 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.6□□□□□ -0.07
FREM3P0C091 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.6□□□□□ -0.07
FREM3P0C091 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.6□□□□□ -0.07
FREM3P0C091 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
FREM3P0C091 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
FREM3P0C091 OR6D1P-203ENST00000641209 4860 ntBASIC14.6□□□□□ -0.07
FREM3P0C091 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FREM3P0C091 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FREM3P0C091 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FREM3P0C091 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 SERBP1P5-201ENST00000510079 1181 ntBASIC14.59□□□□□ -0.07
FREM3P0C091 AC044860.1-202ENST00000559481 777 ntBASIC14.59□□□□□ -0.07
FREM3P0C091 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.59□□□□□ -0.07
FREM3P0C091 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FREM3P0C091 AL589739.1-201ENST00000607720 493 ntBASIC14.59□□□□□ -0.07
FREM3P0C091 IGHV3-72-202ENST00000621503 303 ntBASIC14.59□□□□□ -0.07
FREM3P0C091 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
FREM3P0C091 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 AL162727.3-201ENST00000635661 2787 ntBASIC14.59□□□□□ -0.07
FREM3P0C091 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.59□□□□□ -0.07
FREM3P0C091 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.59□□□□□ -0.07
FREM3P0C091 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FREM3P0C091 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.59□□□□□ -0.07
FREM3P0C091 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.59□□□□□ -0.07
FREM3P0C091 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms