Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD48P09326 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD48P09326 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CD48P09326 AL691432.1-201ENST00000596308 1422 ntBASIC16.7■□□□□ 0.26
CD48P09326 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD48P09326 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CD48P09326 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 AC004461.1-201ENST00000412461 403 ntBASIC16.69■□□□□ 0.26
CD48P09326 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.69■□□□□ 0.26
CD48P09326 DNAJB3-201ENST00000446806 729 ntBASIC16.69■□□□□ 0.26
CD48P09326 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.69■□□□□ 0.26
CD48P09326 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.69■□□□□ 0.26
CD48P09326 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CD48P09326 AL513210.1-201ENST00000629608 234 ntBASIC16.69■□□□□ 0.26
CD48P09326 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD48P09326 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD48P09326 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
CD48P09326 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.68■□□□□ 0.26
CD48P09326 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.68■□□□□ 0.26
CD48P09326 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.68■□□□□ 0.26
CD48P09326 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 BX842568.4-201ENST00000421222 227 ntBASIC16.68■□□□□ 0.26
CD48P09326 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.68■□□□□ 0.26
CD48P09326 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 AC073347.1-201ENST00000421633 2643 ntBASIC16.68■□□□□ 0.26
CD48P09326 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.68■□□□□ 0.26
CD48P09326 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.68■□□□□ 0.26
CD48P09326 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.68■□□□□ 0.26
CD48P09326 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CD48P09326 AC144831.1-201ENST00000573312 2656 ntBASIC16.68■□□□□ 0.26
CD48P09326 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CD48P09326 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD48P09326 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.68■□□□□ 0.26
CD48P09326 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
CD48P09326 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CD48P09326 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.67■□□□□ 0.26
CD48P09326 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CD48P09326 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD48P09326 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.67■□□□□ 0.26
CD48P09326 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms