Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.5■□□□□ 0.23
MT-ND3P03897 ELK2BP-201ENST00000415014 1224 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.5■□□□□ 0.23
MT-ND3P03897 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND3P03897 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.5■□□□□ 0.23
MT-ND3P03897 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.5■□□□□ 0.23
MT-ND3P03897 RPS15P9-201ENST00000494093 319 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND3P03897 MIR4751-201ENST00000578027 74 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.5■□□□□ 0.23
MT-ND3P03897 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND3P03897 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND3P03897 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 AC006504.4-201ENST00000592118 1568 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 AC005622.1-201ENST00000636801 1703 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 AC016027.1-202ENST00000607927 1699 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.49■□□□□ 0.23
MT-ND3P03897 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 AC112482.1-201ENST00000492080 688 ntBASIC16.49■□□□□ 0.23
MT-ND3P03897 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.49■□□□□ 0.23
MT-ND3P03897 IGHV3-65-201ENST00000523210 341 ntBASIC16.49■□□□□ 0.23
MT-ND3P03897 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.49■□□□□ 0.23
MT-ND3P03897 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.49■□□□□ 0.23
MT-ND3P03897 GGTLC5P-201ENST00000617623 998 ntBASIC16.49■□□□□ 0.23
MT-ND3P03897 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND3P03897 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 AL592424.1-201ENST00000563624 1536 ntBASIC16.49■□□□□ 0.23
MT-ND3P03897 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND3P03897 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND3P03897 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
MT-ND3P03897 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
MT-ND3P03897 PPT1-215ENST00000641471 2368 ntBASIC16.48■□□□□ 0.23
MT-ND3P03897 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.48■□□□□ 0.23
MT-ND3P03897 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.48■□□□□ 0.23
MT-ND3P03897 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 AL805961.1-202ENST00000641562 540 ntBASIC16.48■□□□□ 0.23
MT-ND3P03897 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms