Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
ZBED1O96006 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.05■□□□□ 0.32
ZBED1O96006 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.05■□□□□ 0.32
ZBED1O96006 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.05■□□□□ 0.32
ZBED1O96006 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 AC125807.1-201ENST00000483097 614 ntBASIC17.05■□□□□ 0.32
ZBED1O96006 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
ZBED1O96006 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.05■□□□□ 0.32
ZBED1O96006 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 AL596087.1-201ENST00000400979 1969 ntBASIC17.05■□□□□ 0.32
ZBED1O96006 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZBED1O96006 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ZBED1O96006 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 CYMP-203ENST00000474680 1263 ntBASIC17.04■□□□□ 0.32
ZBED1O96006 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.04■□□□□ 0.32
ZBED1O96006 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.04■□□□□ 0.32
ZBED1O96006 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.04■□□□□ 0.32
ZBED1O96006 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 AC093512.1-201ENST00000617969 520 ntBASIC17.04■□□□□ 0.32
ZBED1O96006 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.04■□□□□ 0.32
ZBED1O96006 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.04■□□□□ 0.32
ZBED1O96006 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.04■□□□□ 0.32
ZBED1O96006 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZBED1O96006 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
ZBED1O96006 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ZBED1O96006 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZBED1O96006 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.03■□□□□ 0.32
ZBED1O96006 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZBED1O96006 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.03■□□□□ 0.32
ZBED1O96006 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
ZBED1O96006 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms