Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.37□□□□□ -0.11
CNOT4O95628 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.37□□□□□ -0.11
CNOT4O95628 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.37□□□□□ -0.11
CNOT4O95628 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.37□□□□□ -0.11
CNOT4O95628 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.37□□□□□ -0.11
CNOT4O95628 AC245100.5-201ENST00000452108 331 ntBASIC14.37□□□□□ -0.11
CNOT4O95628 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 AC125807.1-201ENST00000483097 614 ntBASIC14.37□□□□□ -0.11
CNOT4O95628 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.37□□□□□ -0.11
CNOT4O95628 TERF1P3-201ENST00000505638 1227 ntBASIC14.37□□□□□ -0.11
CNOT4O95628 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.37□□□□□ -0.11
CNOT4O95628 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.37□□□□□ -0.11
CNOT4O95628 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.37□□□□□ -0.11
CNOT4O95628 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.37□□□□□ -0.11
CNOT4O95628 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNOT4O95628 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.37□□□□□ -0.11
CNOT4O95628 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNOT4O95628 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.37□□□□□ -0.11
CNOT4O95628 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 AL596257.1-201ENST00000641463 2694 ntBASIC14.37□□□□□ -0.11
CNOT4O95628 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 MST1L-201ENST00000442552 2185 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CNOT4O95628 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CNOT4O95628 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 AC055876.3-201ENST00000431496 288 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.36□□□□□ -0.11
CNOT4O95628 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.36□□□□□ -0.11
CNOT4O95628 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.36□□□□□ -0.11
CNOT4O95628 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.36□□□□□ -0.11
CNOT4O95628 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.36□□□□□ -0.11
CNOT4O95628 AC061975.2-201ENST00000581722 295 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 AL158211.3-201ENST00000607385 239 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 AC138649.4-201ENST00000612222 287 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 ME2P1-201ENST00000426028 1970 ntBASIC14.36□□□□□ -0.11
CNOT4O95628 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNOT4O95628 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CNOT4O95628 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
CNOT4O95628 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms