Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.3■□□□□ 0.36
CSPG5O95196 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.3■□□□□ 0.36
CSPG5O95196 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSPG5O95196 AC093726.1-201ENST00000608064 963 ntBASIC17.3■□□□□ 0.36
CSPG5O95196 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSPG5O95196 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CSPG5O95196 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.3■□□□□ 0.36
CSPG5O95196 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CSPG5O95196 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
CSPG5O95196 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CSPG5O95196 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG5O95196 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CSPG5O95196 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CSPG5O95196 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CSPG5O95196 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CSPG5O95196 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.29■□□□□ 0.36
CSPG5O95196 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CSPG5O95196 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.29■□□□□ 0.36
CSPG5O95196 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 AC024267.1-201ENST00000582320 895 ntBASIC17.29■□□□□ 0.36
CSPG5O95196 AC026979.3-201ENST00000607315 403 ntBASIC17.29■□□□□ 0.36
CSPG5O95196 AL033527.5-201ENST00000641382 801 ntBASIC17.29■□□□□ 0.36
CSPG5O95196 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CSPG5O95196 AL512652.2-201ENST00000625156 1716 ntBASIC17.29■□□□□ 0.36
CSPG5O95196 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CSPG5O95196 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
CSPG5O95196 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CSPG5O95196 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.29■□□□□ 0.36
CSPG5O95196 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CSPG5O95196 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.29■□□□□ 0.36
CSPG5O95196 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.29■□□□□ 0.36
CSPG5O95196 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG5O95196 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.28■□□□□ 0.36
CSPG5O95196 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CSPG5O95196 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.28■□□□□ 0.36
CSPG5O95196 UBALD1-205ENST00000590891 2641 ntBASIC17.28■□□□□ 0.36
CSPG5O95196 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CSPG5O95196 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CSPG5O95196 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.28■□□□□ 0.36
CSPG5O95196 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.28■□□□□ 0.36
CSPG5O95196 AC007389.4-201ENST00000454674 793 ntBASIC17.28■□□□□ 0.36
CSPG5O95196 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.28■□□□□ 0.36
CSPG5O95196 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.28■□□□□ 0.36
CSPG5O95196 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 AC106886.1-201ENST00000568660 600 ntBASIC17.28■□□□□ 0.36
CSPG5O95196 AC061975.2-201ENST00000581722 295 ntBASIC17.28■□□□□ 0.36
CSPG5O95196 MIR6069-201ENST00000620069 79 ntBASIC17.28■□□□□ 0.36
CSPG5O95196 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.28■□□□□ 0.36
CSPG5O95196 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSPG5O95196 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CSPG5O95196 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CSPG5O95196 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSPG5O95196 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.28■□□□□ 0.36
CSPG5O95196 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.27■□□□□ 0.36
CSPG5O95196 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.27■□□□□ 0.36
CSPG5O95196 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSPG5O95196 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms