Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.91■□□□□ 0.94
LTN1O94822 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.91■□□□□ 0.94
LTN1O94822 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.91■□□□□ 0.94
LTN1O94822 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LTN1O94822 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.9■□□□□ 0.94
LTN1O94822 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LTN1O94822 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.9■□□□□ 0.94
LTN1O94822 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 AC008687.7-202ENST00000637404 953 ntBASIC20.9■□□□□ 0.94
LTN1O94822 AC068587.10-201ENST00000641210 219 ntBASIC20.9■□□□□ 0.94
LTN1O94822 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LTN1O94822 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LTN1O94822 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 AC106820.2-201ENST00000563775 3264 ntBASIC20.9■□□□□ 0.94
LTN1O94822 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LTN1O94822 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.9■□□□□ 0.94
LTN1O94822 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.9■□□□□ 0.94
LTN1O94822 KRT18P25-201ENST00000508931 1278 ntBASIC20.9■□□□□ 0.94
LTN1O94822 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.9■□□□□ 0.94
LTN1O94822 AL118558.3-201ENST00000607414 1079 ntBASIC20.9■□□□□ 0.94
LTN1O94822 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTN1O94822 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LTN1O94822 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.89■□□□□ 0.94
LTN1O94822 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LTN1O94822 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.89■□□□□ 0.94
LTN1O94822 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
LTN1O94822 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LTN1O94822 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LTN1O94822 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LTN1O94822 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LTN1O94822 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.89■□□□□ 0.93
LTN1O94822 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.89■□□□□ 0.93
LTN1O94822 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.89■□□□□ 0.93
LTN1O94822 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LTN1O94822 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.89■□□□□ 0.93
LTN1O94822 GPAA1P2-201ENST00000417923 928 ntBASIC20.89■□□□□ 0.93
LTN1O94822 GOLGA2P4-201ENST00000441462 777 ntBASIC20.89■□□□□ 0.93
LTN1O94822 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.89■□□□□ 0.93
LTN1O94822 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.89■□□□□ 0.93
LTN1O94822 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.89■□□□□ 0.93
LTN1O94822 ECM1P1-201ENST00000604092 1279 ntBASIC20.89■□□□□ 0.93
LTN1O94822 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.89■□□□□ 0.93
LTN1O94822 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.89■□□□□ 0.93
LTN1O94822 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LTN1O94822 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.89■□□□□ 0.93
LTN1O94822 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LTN1O94822 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LTN1O94822 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.88■□□□□ 0.93
LTN1O94822 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.88■□□□□ 0.93
LTN1O94822 AC124067.4-201ENST00000519691 2379 ntBASIC20.88■□□□□ 0.93
LTN1O94822 AP003171.2-201ENST00000528208 925 ntBASIC20.88■□□□□ 0.93
LTN1O94822 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LTN1O94822 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.88■□□□□ 0.93
LTN1O94822 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.88■□□□□ 0.93
LTN1O94822 AC145423.3-201ENST00000615987 467 ntBASIC20.88■□□□□ 0.93
LTN1O94822 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
LTN1O94822 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.88■□□□□ 0.93
LTN1O94822 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LTN1O94822 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LTN1O94822 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.87■□□□□ 0.93
LTN1O94822 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.87■□□□□ 0.93
LTN1O94822 AC004945.1-201ENST00000416738 983 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms