Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.2■□□□□ 0.18
RFPL1O75677 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.2■□□□□ 0.18
RFPL1O75677 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL1O75677 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 ELL2P1-201ENST00000413990 1906 ntBASIC16.19■□□□□ 0.18
RFPL1O75677 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RFPL1O75677 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 AP002472.1-201ENST00000577490 586 ntBASIC16.19■□□□□ 0.18
RFPL1O75677 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.19■□□□□ 0.18
RFPL1O75677 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.19■□□□□ 0.18
RFPL1O75677 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.19■□□□□ 0.18
RFPL1O75677 AL513190.1-201ENST00000621254 727 ntBASIC16.19■□□□□ 0.18
RFPL1O75677 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 AC011477.6-201ENST00000604980 1927 ntBASIC16.19■□□□□ 0.18
RFPL1O75677 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL1O75677 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFPL1O75677 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFPL1O75677 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.18■□□□□ 0.18
RFPL1O75677 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFPL1O75677 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.18■□□□□ 0.18
RFPL1O75677 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 AL645939.2-201ENST00000427340 991 ntBASIC16.18■□□□□ 0.18
RFPL1O75677 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RFPL1O75677 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.18■□□□□ 0.18
RFPL1O75677 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 AL031432.2-201ENST00000566714 459 ntBASIC16.18■□□□□ 0.18
RFPL1O75677 AL928711.1-201ENST00000570165 459 ntBASIC16.18■□□□□ 0.18
RFPL1O75677 MIR3197-201ENST00000582241 73 ntBASIC16.18■□□□□ 0.18
RFPL1O75677 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.18■□□□□ 0.18
RFPL1O75677 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.18■□□□□ 0.18
RFPL1O75677 AL645728.2-201ENST00000641974 660 ntBASIC16.18■□□□□ 0.18
RFPL1O75677 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RFPL1O75677 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFPL1O75677 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms