Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.23■□□□□ 0.19
GPC4O75487 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.23■□□□□ 0.19
GPC4O75487 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.23■□□□□ 0.19
GPC4O75487 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.23■□□□□ 0.19
GPC4O75487 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.23■□□□□ 0.19
GPC4O75487 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.23■□□□□ 0.19
GPC4O75487 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GPC4O75487 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.23■□□□□ 0.19
GPC4O75487 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.23■□□□□ 0.19
GPC4O75487 AL078644.1-201ENST00000609881 752 ntBASIC16.23■□□□□ 0.19
GPC4O75487 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 C20orf181-201ENST00000623918 480 ntBASIC16.23■□□□□ 0.19
GPC4O75487 AC092902.6-201ENST00000641783 218 ntBASIC16.23■□□□□ 0.19
GPC4O75487 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
GPC4O75487 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.23■□□□□ 0.19
GPC4O75487 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.23■□□□□ 0.19
GPC4O75487 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.23■□□□□ 0.19
GPC4O75487 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.23■□□□□ 0.19
GPC4O75487 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GPC4O75487 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 WASH6P-202ENST00000359512 1437 ntBASIC16.22■□□□□ 0.19
GPC4O75487 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
GPC4O75487 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.22■□□□□ 0.19
GPC4O75487 FAM58CP-201ENST00000435741 640 ntBASIC16.22■□□□□ 0.19
GPC4O75487 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.22■□□□□ 0.19
GPC4O75487 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.22■□□□□ 0.19
GPC4O75487 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.22■□□□□ 0.19
GPC4O75487 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GPC4O75487 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.22■□□□□ 0.19
GPC4O75487 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GPC4O75487 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.22■□□□□ 0.19
GPC4O75487 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
GPC4O75487 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
GPC4O75487 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GPC4O75487 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GPC4O75487 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 AC016027.1-202ENST00000607927 1699 ntBASIC16.21■□□□□ 0.19
GPC4O75487 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GPC4O75487 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.21■□□□□ 0.19
GPC4O75487 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GPC4O75487 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GPC4O75487 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GPC4O75487 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GPC4O75487 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
GPC4O75487 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 MKNK2P1-201ENST00000437526 628 ntBASIC16.21■□□□□ 0.19
GPC4O75487 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.21■□□□□ 0.19
GPC4O75487 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.21■□□□□ 0.19
GPC4O75487 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.21■□□□□ 0.19
GPC4O75487 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.21■□□□□ 0.19
GPC4O75487 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.21■□□□□ 0.19
GPC4O75487 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GPC4O75487 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms