Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SEMA3EO15041 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA3EO15041 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA3EO15041 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 GIMAP3P-201ENST00000495150 836 ntBASIC19.26■□□□□ 0.67
SEMA3EO15041 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.26■□□□□ 0.67
SEMA3EO15041 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SEMA3EO15041 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA3EO15041 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SEMA3EO15041 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SEMA3EO15041 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA3EO15041 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA3EO15041 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA3EO15041 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SEMA3EO15041 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA3EO15041 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA3EO15041 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA3EO15041 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SEMA3EO15041 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SEMA3EO15041 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SEMA3EO15041 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.25■□□□□ 0.67
SEMA3EO15041 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
SEMA3EO15041 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.25■□□□□ 0.67
SEMA3EO15041 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 AC092552.1-201ENST00000547243 906 ntBASIC19.25■□□□□ 0.67
SEMA3EO15041 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.25■□□□□ 0.67
SEMA3EO15041 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA3EO15041 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SEMA3EO15041 MIR8072-201ENST00000614241 80 ntBASIC19.25■□□□□ 0.67
SEMA3EO15041 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3EO15041 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA3EO15041 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.24■□□□□ 0.67
SEMA3EO15041 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SEMA3EO15041 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SEMA3EO15041 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SEMA3EO15041 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SEMA3EO15041 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.24■□□□□ 0.67
SEMA3EO15041 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.24■□□□□ 0.67
SEMA3EO15041 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.24■□□□□ 0.67
SEMA3EO15041 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3EO15041 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3EO15041 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.24■□□□□ 0.67
SEMA3EO15041 CLK3P2-201ENST00000427566 1453 ntBASIC19.23■□□□□ 0.67
SEMA3EO15041 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3EO15041 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3EO15041 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3EO15041 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA3EO15041 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms