Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC25.34■■□□□ 1.65
CHD1O14646 AC103691.2-201ENST00000618824 433 ntBASIC25.34■■□□□ 1.65
CHD1O14646 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD1O14646 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC25.33■■□□□ 1.65
CHD1O14646 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 CHMP1AP1-201ENST00000445563 662 ntBASIC25.33■■□□□ 1.65
CHD1O14646 NEU3-205ENST00000531619 582 ntTSL 5 BASIC25.33■■□□□ 1.65
CHD1O14646 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
CHD1O14646 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC25.33■■□□□ 1.65
CHD1O14646 RPL17P45-201ENST00000586289 509 ntBASIC25.33■■□□□ 1.65
CHD1O14646 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC25.33■■□□□ 1.65
CHD1O14646 GPR39-203ENST00000622084 900 ntTSL 5 BASIC25.33■■□□□ 1.65
CHD1O14646 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
CHD1O14646 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD1O14646 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC25.33■■□□□ 1.65
CHD1O14646 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CHD1O14646 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
CHD1O14646 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CHD1O14646 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CHD1O14646 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC25.33■■□□□ 1.64
CHD1O14646 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CHD1O14646 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC25.33■■□□□ 1.64
CHD1O14646 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CHD1O14646 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 AL136309.1-201ENST00000403917 691 ntBASIC25.32■■□□□ 1.64
CHD1O14646 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 POU5F1P6-201ENST00000466990 990 ntBASIC25.32■■□□□ 1.64
CHD1O14646 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC25.32■■□□□ 1.64
CHD1O14646 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC25.32■■□□□ 1.64
CHD1O14646 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CHD1O14646 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 AC004899.1-201ENST00000424687 1714 ntBASIC25.32■■□□□ 1.64
CHD1O14646 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
CHD1O14646 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD1O14646 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CHD1O14646 MVK-214ENST00000629016 1591 ntTSL 5 BASIC25.32■■□□□ 1.64
CHD1O14646 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC25.32■■□□□ 1.64
CHD1O14646 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
CHD1O14646 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC25.32■■□□□ 1.64
CHD1O14646 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC25.32■■□□□ 1.64
CHD1O14646 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1O14646 AC242376.2-201ENST00000619355 883 ntBASIC25.32■■□□□ 1.64
CHD1O14646 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CHD1O14646 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
CHD1O14646 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 KRT8P29-201ENST00000420409 1371 ntBASIC25.31■■□□□ 1.64
CHD1O14646 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CHD1O14646 POLL-217ENST00000628479 1953 ntTSL 5 BASIC25.31■■□□□ 1.64
CHD1O14646 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC25.31■■□□□ 1.64
CHD1O14646 AC006335.1-201ENST00000445200 547 ntBASIC25.31■■□□□ 1.64
CHD1O14646 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC25.31■■□□□ 1.64
CHD1O14646 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CHD1O14646 KRT8P4-201ENST00000509735 1454 ntBASIC25.31■■□□□ 1.64
CHD1O14646 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1O14646 LRRC59-203ENST00000576448 1531 ntBASIC25.31■■□□□ 1.64
CHD1O14646 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CHD1O14646 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
CHD1O14646 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC25.3■■□□□ 1.64
CHD1O14646 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC25.3■■□□□ 1.64
CHD1O14646 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
CHD1O14646 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC25.3■■□□□ 1.64
CHD1O14646 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD1O14646 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC25.3■■□□□ 1.64
CHD1O14646 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1O14646 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1O14646 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1O14646 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1O14646 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 AL022344.2-201ENST00000568976 968 ntBASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms