Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 FAM220BP-201ENST00000377689 816 ntBASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 SERBP1P5-201ENST00000510079 1181 ntBASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC126177.1-201ENST00000547829 2218 ntBASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC098859.1-201ENST00000502915 1238 ntBASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC124947.2-201ENST00000547118 1133 ntBASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL662799.1-202ENST00000614205 422 ntBASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL138828.2-201ENST00000615812 383 ntBASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 SPTSSB-204ENST00000617024 1292 ntBASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMX2-CTNND1H3BSU7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms