Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 AC007326.2-201ENST00000624224 7579 ntBASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 AL662844.4-201ENST00000606367 2838 ntBASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 AC093724.1-201ENST00000448659 1027 ntBASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 AC004233.3-201ENST00000607794 1269 ntBASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 AC009118.2-201ENST00000613275 655 ntBASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 MIR600HG-201ENST00000449175 5984 ntBASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA2E9PIF3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 RPL37AP1-201ENST00000412502 279 ntBASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AC005034.1-201ENST00000426657 489 ntBASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AC024267.1-201ENST00000582320 895 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms