Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
YJEFN3A6XGL0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AC011477.6-201ENST00000604980 1927 ntBASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AC018695.7-201ENST00000624587 2492 ntBASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 RN7SL618P-201ENST00000477850 296 ntBASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 MIR6069-201ENST00000620069 79 ntBASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YJEFN3A6XGL0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC022144.1-201ENST00000602255 1580 ntBASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
YJEFN3A6XGL0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms