Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 AL033527.5-201ENST00000641382 801 ntBASIC14.05□□□□□ -0.16
MBD3L3A6NE82 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MBD3L3A6NE82 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AC097359.3-201ENST00000603982 1210 ntBASIC14.04□□□□□ -0.16
MBD3L3A6NE82 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MBD3L3A6NE82 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 AC011477.6-201ENST00000604980 1927 ntBASIC14.03□□□□□ -0.16
MBD3L3A6NE82 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 KRT18P64-201ENST00000434946 1219 ntBASIC14.03□□□□□ -0.16
MBD3L3A6NE82 FAM86LP-201ENST00000478302 853 ntBASIC14.03□□□□□ -0.16
MBD3L3A6NE82 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 AC015936.2-201ENST00000593177 259 ntBASIC14.03□□□□□ -0.16
MBD3L3A6NE82 BRI3BPP1-201ENST00000594224 787 ntBASIC14.03□□□□□ -0.16
MBD3L3A6NE82 AL008721.1-201ENST00000609964 604 ntBASIC14.03□□□□□ -0.16
MBD3L3A6NE82 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MBD3L3A6NE82 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MBD3L3A6NE82 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MBD3L3A6NE82 NKILA-202ENST00000614771 2598 ntBASIC14.02□□□□□ -0.16
MBD3L3A6NE82 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MBD3L3A6NE82 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms