Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 POU5F1P6-201ENST00000466990 990 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 TDH-203ENST00000531764 1110 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 MIR5189-201ENST00000577370 114 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 PDIA3P1-201ENST00000471856 1510 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 FAM86LP-201ENST00000478302 853 ntBASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 RN7SL219P-201ENST00000582872 296 ntBASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC187A0A096LP49 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 ACTBP11-201ENST00000436287 1126 ntBASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 BRI3BPP1-201ENST00000594224 787 ntBASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms