Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MIR574-201ENST00000385209 96 ntBASIC18.4■□□□□ 0.54
CLIC4Q9Y696 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 SPCS2P4-201ENST00000436160 681 ntBASIC18.4■□□□□ 0.54
CLIC4Q9Y696 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 LINC01225-203ENST00000563550 1244 ntBASIC18.4■□□□□ 0.54
CLIC4Q9Y696 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIC4Q9Y696 AC011270.2-201ENST00000624293 2550 ntBASIC18.39■□□□□ 0.54
CLIC4Q9Y696 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CLIC4Q9Y696 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 AC092127.1-201ENST00000567093 3455 ntBASIC18.39■□□□□ 0.53
CLIC4Q9Y696 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 AL691432.1-201ENST00000596308 1422 ntBASIC18.39■□□□□ 0.53
CLIC4Q9Y696 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIC4Q9Y696 BNIP3P1-202ENST00000550043 1585 ntBASIC18.38■□□□□ 0.53
CLIC4Q9Y696 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 MCCD1P2-201ENST00000423228 335 ntBASIC18.38■□□□□ 0.53
CLIC4Q9Y696 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 AC040169.1-201ENST00000565382 521 ntBASIC18.38■□□□□ 0.53
CLIC4Q9Y696 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIC4Q9Y696 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms