Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 AC103810.3-201ENST00000583567 96 ntBASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA1Q9Y5H4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AL136982.4-201ENST00000437689 1740 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 GGT4P-201ENST00000623672 1708 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AC005229.1-201ENST00000392885 409 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 TDH-203ENST00000531764 1110 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AL158212.4-201ENST00000624062 1286 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA1Q9Y5H4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 AC099336.1-201ENST00000417053 1171 ntBASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 RPL7P3-201ENST00000441388 714 ntBASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 CSF2RBP1-201ENST00000447905 391 ntBASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 RPL13AP25-201ENST00000484130 612 ntBASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 PTP4A1P2-201ENST00000546033 454 ntBASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA1Q9Y5H4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms