Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGC4Q9Y5F7 AL513523.2-202ENST00000427283 2040 ntBASIC16.27■□□□□ 0.2
PCDHGC4Q9Y5F7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGC4Q9Y5F7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGC4Q9Y5F7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 FO538757.1-201ENST00000623083 1397 ntBASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 AL603832.2-201ENST00000566195 2125 ntBASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 AL589739.1-201ENST00000607720 493 ntBASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 TNRC18P3-201ENST00000441896 2691 ntBASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 CYP4F24P-201ENST00000586049 1580 ntBASIC16.26■□□□□ 0.19
PCDHGC4Q9Y5F7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 AC097493.3-201ENST00000509725 367 ntBASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 AC243562.2-201ENST00000561247 970 ntBASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 SPDYE12P-201ENST00000618416 771 ntBASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 BNIP3P1-202ENST00000550043 1585 ntBASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 CDC14C-201ENST00000428251 1719 ntBASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC4Q9Y5F7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms