Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
YIPF1Q9Y548 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 AC006449.6-201ENST00000612330 2296 ntBASIC16.72■□□□□ 0.27
YIPF1Q9Y548 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 REXO1L1P-202ENST00000608646 1974 ntBASIC16.72■□□□□ 0.27
YIPF1Q9Y548 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 HNRNPUP1-201ENST00000554987 333 ntBASIC16.72■□□□□ 0.27
YIPF1Q9Y548 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YIPF1Q9Y548 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 KRT18P64-201ENST00000434946 1219 ntBASIC16.71■□□□□ 0.27
YIPF1Q9Y548 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 ACA64.2-201ENST00000459014 129 ntBASIC16.71■□□□□ 0.27
YIPF1Q9Y548 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 AL033527.5-201ENST00000641382 801 ntBASIC16.71■□□□□ 0.27
YIPF1Q9Y548 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF1Q9Y548 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
YIPF1Q9Y548 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 AC112492.5-201ENST00000421897 457 ntBASIC16.7■□□□□ 0.26
YIPF1Q9Y548 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 AC007389.4-201ENST00000454674 793 ntBASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PHKG1P2-201ENST00000457537 863 ntBASIC16.7■□□□□ 0.26
YIPF1Q9Y548 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 SLED1-202ENST00000512051 380 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms