Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 BCAR1-209ENST00000546196 1340 ntBASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 AC025580.3-201ENST00000617932 1424 ntBASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 KRT18P2-201ENST00000447938 1258 ntBASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 MIR3909-201ENST00000579518 119 ntBASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 AC004877.2-201ENST00000623941 599 ntBASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RHBDD3Q9Y3P4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 AC144831.1-201ENST00000573312 2656 ntBASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 MST1L-201ENST00000442552 2185 ntBASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RHBDD3Q9Y3P4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AL592424.1-201ENST00000563624 1536 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms