Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 HLA-V-204ENST00000476601 1289 ntBASIC15.85■□□□□ 0.13
SATB2Q9UPW6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 AC073389.1-201ENST00000595595 795 ntBASIC15.84■□□□□ 0.13
SATB2Q9UPW6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 CU639417.3-201ENST00000624240 1404 ntBASIC15.84■□□□□ 0.13
SATB2Q9UPW6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SATB2Q9UPW6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 AGGF1P2-201ENST00000426656 2106 ntBASIC15.83■□□□□ 0.13
SATB2Q9UPW6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SATB2Q9UPW6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
SATB2Q9UPW6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms