Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.78■□□□□ 0.92
PDZRN3Q9UPQ7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 AC138969.3-201ENST00000546612 1459 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 AC138932.2-201ENST00000548268 1459 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 AC126755.4-201ENST00000549796 1459 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 IGHV3-71-201ENST00000523324 359 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ZNF890P-202ENST00000530367 1156 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 API5-211ENST00000534695 560 ntTSL 5 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 TEX28P1-201ENST00000613479 1221 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 TEX28P2-201ENST00000617764 1221 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 CETN4P-206ENST00000642099 2168 ntBASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDZRN3Q9UPQ7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PDZRN3Q9UPQ7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDZRN3Q9UPQ7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDZRN3Q9UPQ7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDZRN3Q9UPQ7 BTBD7P1-201ENST00000447253 1453 ntBASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 FAM220BP-201ENST00000377689 816 ntBASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 AL132655.2-201ENST00000596276 594 ntBASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDZRN3Q9UPQ7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms