Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AL353732.1-201ENST00000569618 1459 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC114501.2-201ENST00000439631 535 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AP001889.1-201ENST00000525414 633 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 BNIP3P35-201ENST00000604530 490 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC069503.1-202ENST00000616576 642 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 AC134043.2-201ENST00000624206 2238 ntBASIC15.36■□□□□ 0.05
LHX6Q9UPM6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LHX6Q9UPM6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 AC082651.2-201ENST00000496833 166 ntBASIC15.35■□□□□ 0.05
LHX6Q9UPM6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 MIR4706-201ENST00000582134 82 ntBASIC15.35■□□□□ 0.05
LHX6Q9UPM6 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.35■□□□□ 0.05
LHX6Q9UPM6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 AC006033.1-201ENST00000440505 426 ntBASIC15.34■□□□□ 0.05
LHX6Q9UPM6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 AC009268.1-201ENST00000561352 1203 ntBASIC15.34■□□□□ 0.05
LHX6Q9UPM6 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.34■□□□□ 0.05
LHX6Q9UPM6 AC105021.1-202ENST00000570572 669 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms