Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 AC092364.2-201ENST00000596710 2692 ntBASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 DOC2GP-204ENST00000639052 2548 ntBASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 GGT4P-201ENST00000623672 1708 ntBASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 NORAD-201ENST00000565493 5339 ntBASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 RNA5SP410-201ENST00000516285 106 ntBASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 AC005052.1-201ENST00000625181 2492 ntBASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 CYP2T1P-202ENST00000641596 2535 ntBASIC14.89□□□□□ -0.03
NPIPA1Q9UND3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms