Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.03□□□□□ -0.16
RDH8Q9NYR8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RDH8Q9NYR8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 LINC00895-201ENST00000629028 1637 ntBASIC14.02□□□□□ -0.16
RDH8Q9NYR8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RDH8Q9NYR8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 AL591684.3-201ENST00000605187 298 ntBASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NPAP1P7-201ENST00000613027 823 ntBASIC14.02□□□□□ -0.17
RDH8Q9NYR8 AC107918.4-201ENST00000641966 3141 ntBASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RDH8Q9NYR8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.01□□□□□ -0.17
RDH8Q9NYR8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 AC092119.3-201ENST00000612618 583 ntBASIC14.01□□□□□ -0.17
RDH8Q9NYR8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RDH8Q9NYR8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms