Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 HCG4-201ENST00000418983 998 ntBASIC14.79□□□□□ -0.04
CLN6Q9NWW5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.79□□□□□ -0.04
CLN6Q9NWW5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 KRT18P21-201ENST00000515767 1272 ntBASIC14.79□□□□□ -0.04
CLN6Q9NWW5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.79□□□□□ -0.04
CLN6Q9NWW5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLN6Q9NWW5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 ATP5G2P1-201ENST00000433580 426 ntBASIC14.78□□□□□ -0.04
CLN6Q9NWW5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 AC005412.3-201ENST00000580309 715 ntBASIC14.78□□□□□ -0.04
CLN6Q9NWW5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 AC138894.3-201ENST00000603787 634 ntBASIC14.78□□□□□ -0.04
CLN6Q9NWW5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.78□□□□□ -0.04
CLN6Q9NWW5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 CICP13-201ENST00000422015 2789 ntBASIC14.77□□□□□ -0.04
CLN6Q9NWW5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.77□□□□□ -0.04
CLN6Q9NWW5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms