Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 KRT18P28-201ENST00000453838 1332 ntBASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SDHAF3Q9NRP4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 MIR648-201ENST00000385046 94 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 GPS2P2-201ENST00000430745 888 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CNN2P2-201ENST00000443536 909 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CNN2P3-201ENST00000450201 906 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 AC003101.2-201ENST00000612557 442 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 AL136317.3-201ENST00000618497 906 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CYP2T1P-202ENST00000641596 2535 ntBASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SDHAF3Q9NRP4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 AC126755.1-201ENST00000525846 6405 ntBASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SDHAF3Q9NRP4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 SPDYE14P-201ENST00000442619 822 ntBASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AC067863.1-201ENST00000494933 530 ntBASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AC069262.1-201ENST00000539058 672 ntBASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 MIR6080-201ENST00000617359 66 ntBASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.83□□□□□ -0.04
SDHAF3Q9NRP4 PCDHB19P-201ENST00000570871 2371 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms