Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 SLC25A47P1-201ENST00000531577 414 ntBASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 AC103810.3-201ENST00000583567 96 ntBASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 CYP4F24P-201ENST00000586049 1580 ntBASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 TIMM17BP1-201ENST00000545713 516 ntBASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC025048.3-201ENST00000590609 569 ntBASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC005702.4-201ENST00000618393 416 ntBASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AC006449.5-201ENST00000610658 2098 ntBASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM7Q9NR12 AL662844.4-201ENST00000606367 2838 ntBASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 HIST3H2BA-201ENST00000436555 524 ntBASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AC108725.1-201ENST00000495472 409 ntBASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 RNA5SP412-201ENST00000516234 123 ntBASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AC084018.2-201ENST00000613093 2607 ntBASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms