Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC012569.1-201ENST00000591191 1524 ntBASIC19.87■□□□□ 0.77
UPF2Q9HAU5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 HAUS4P1-201ENST00000406739 1145 ntBASIC19.87■□□□□ 0.77
UPF2Q9HAU5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 SCARNA2-201ENST00000458748 420 ntBASIC19.87■□□□□ 0.77
UPF2Q9HAU5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 AL732292.2-201ENST00000609649 430 ntBASIC19.87■□□□□ 0.77
UPF2Q9HAU5 AL355877.3-201ENST00000622820 899 ntBASIC19.87■□□□□ 0.77
UPF2Q9HAU5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 ATP5G2P1-201ENST00000433580 426 ntBASIC19.86■□□□□ 0.77
UPF2Q9HAU5 AC021097.1-201ENST00000607902 574 ntBASIC19.86■□□□□ 0.77
UPF2Q9HAU5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF2Q9HAU5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SART3-203ENST00000546611 1184 ntBASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 CICP13-201ENST00000422015 2789 ntBASIC19.85■□□□□ 0.77
UPF2Q9HAU5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF2Q9HAU5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.84■□□□□ 0.77
UPF2Q9HAU5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms