Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC241585.1-201ENST00000433527 519 ntBASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC025423.2-201ENST00000537570 439 ntBASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC133552.4-201ENST00000576103 676 ntBASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 AC138035.3-201ENST00000622706 2791 ntBASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 AC092580.3-201ENST00000430932 139 ntBASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 MTND1P31-201ENST00000449206 961 ntBASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 AC118282.1-201ENST00000506408 765 ntBASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SCAF1Q9H7N4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.47
SCAF1Q9H7N4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AC243562.1-201ENST00000560672 389 ntBASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 AC024933.1-201ENST00000608472 348 ntBASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SCAF1Q9H7N4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 CALY-202ENST00000368555 783 ntTSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 AC096633.1-201ENST00000422446 749 ntBASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC24.25■■□□□ 1.47
SCAF1Q9H7N4 AC092552.1-201ENST00000547243 906 ntBASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms