Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF41Q9H4P4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF41Q9H4P4 AC087499.5-201ENST00000452760 1342 ntBASIC18.97■□□□□ 0.63
RNF41Q9H4P4 LINC02447-202ENST00000501888 2146 ntBASIC18.97■□□□□ 0.63
RNF41Q9H4P4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF41Q9H4P4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.96■□□□□ 0.63
RNF41Q9H4P4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 DOC2GP-204ENST00000639052 2548 ntBASIC18.96■□□□□ 0.63
RNF41Q9H4P4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 RNA5SP421-201ENST00000516864 134 ntBASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AL603832.2-201ENST00000566195 2125 ntBASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AL355385.1-201ENST00000606123 409 ntBASIC18.96■□□□□ 0.63
RNF41Q9H4P4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 AL391005.1-201ENST00000623953 2435 ntBASIC18.96■□□□□ 0.63
RNF41Q9H4P4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF41Q9H4P4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 AC026691.1-201ENST00000602502 2017 ntBASIC18.95■□□□□ 0.62
RNF41Q9H4P4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.95■□□□□ 0.62
RNF41Q9H4P4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.95■□□□□ 0.62
RNF41Q9H4P4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 RN7SL618P-201ENST00000477850 296 ntBASIC18.95■□□□□ 0.62
RNF41Q9H4P4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 AL033527.5-202ENST00000641632 1098 ntBASIC18.95■□□□□ 0.62
RNF41Q9H4P4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
RNF41Q9H4P4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 REXO1L1P-202ENST00000608646 1974 ntBASIC18.94■□□□□ 0.62
RNF41Q9H4P4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms