Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 PMS2P4-201ENST00000412466 1052 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 KRT18P67-201ENST00000432816 1264 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AF186996.4-201ENST00000467186 377 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AC108751.1-201ENST00000490852 363 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AL031432.2-201ENST00000566714 459 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AL928711.1-201ENST00000570165 459 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 FAM215A-202ENST00000632077 792 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AC023157.3-201ENST00000619086 2088 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 AL136379.1-201ENST00000623471 2642 ntBASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 IGLL3P-201ENST00000412472 434 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AP002469.2-201ENST00000531724 424 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MIR3909-201ENST00000579518 119 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AL049840.3-201ENST00000602669 611 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AL121912.1-201ENST00000603683 238 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 AL645728.2-201ENST00000641974 660 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HDHD3Q9BSH5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HDHD3Q9BSH5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HDHD3Q9BSH5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HDHD3Q9BSH5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms