Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 ZNF444P1-201ENST00000559497 298 ntBASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 AC015656.1-201ENST00000624209 3578 ntBASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 NUS1P1-201ENST00000446295 882 ntBASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 EGLN1P1-201ENST00000531623 762 ntBASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAB3IPQ96QF0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 FAM8A6P-201ENST00000407496 1135 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 GCSHP2-201ENST00000560971 527 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 NAPSB-206ENST00000562112 1266 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 LINC01238-205ENST00000567549 1107 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 AL590326.2-201ENST00000625139 305 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 AJ011931.1-201ENST00000618749 2492 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 AC148477.4-201ENST00000613430 1793 ntBASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3IPQ96QF0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms