Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CYP4F24P-201ENST00000586049 1580 ntBASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 PRAL-201ENST00000624952 3286 ntBASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 AC004461.1-201ENST00000412461 403 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 AC112482.1-201ENST00000492080 688 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 AP000344.2-201ENST00000512987 629 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MIR3687-2-201ENST00000577708 61 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MIR4469-201ENST00000583919 79 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MIR3687-1-201ENST00000614492 61 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 AC092384.3-202ENST00000564646 2873 ntBASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM5Q96HC4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 KRT8P37-201ENST00000451609 1420 ntBASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 RPSAP43-201ENST00000402237 625 ntBASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AL627223.1-201ENST00000416693 442 ntBASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AC005237.2-201ENST00000434368 219 ntBASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 ALG1L8P-201ENST00000533887 760 ntBASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AC093520.2-201ENST00000561830 333 ntBASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM5Q96HC4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDLIM5Q96HC4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDLIM5Q96HC4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms