Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PGBD4Q96DM1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.44■□□□□ 0.38
PGBD4Q96DM1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PGBD4Q96DM1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
PGBD4Q96DM1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 PCDHA14-201ENST00000506751 2298 ntBASIC17.43■□□□□ 0.38
PGBD4Q96DM1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PGBD4Q96DM1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AP006294.1-201ENST00000415407 339 ntBASIC17.42■□□□□ 0.38
PGBD4Q96DM1 HIST3H2BA-201ENST00000436555 524 ntBASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC025048.3-201ENST00000590609 569 ntBASIC17.42■□□□□ 0.38
PGBD4Q96DM1 CHCHD2P3-201ENST00000603038 451 ntBASIC17.42■□□□□ 0.38
PGBD4Q96DM1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC004790.1-201ENST00000612686 536 ntBASIC17.42■□□□□ 0.38
PGBD4Q96DM1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AC005702.4-201ENST00000618393 416 ntBASIC17.42■□□□□ 0.38
PGBD4Q96DM1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PGBD4Q96DM1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PGBD4Q96DM1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms