Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 SDHAP3-202ENST00000515467 728 ntBASIC16.13■□□□□ 0.17
CHD5Q8TDI0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 AC099568.2-201ENST00000609194 695 ntBASIC16.12■□□□□ 0.17
CHD5Q8TDI0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 AC007950.2-201ENST00000615045 2347 ntBASIC16.12■□□□□ 0.17
CHD5Q8TDI0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD5Q8TDI0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RRP7BP-205ENST00000566851 833 ntBASIC16.11■□□□□ 0.17
CHD5Q8TDI0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 AP005117.1-202ENST00000581724 1908 ntBASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 AC098850.1-201ENST00000419919 790 ntBASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RPL13P2-201ENST00000440687 659 ntBASIC16.11■□□□□ 0.17
CHD5Q8TDI0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 AL645728.2-202ENST00000641679 227 ntBASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms