Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CFAP61Q8NHU2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFAP61Q8NHU2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.44■□□□□ 0.22
CFAP61Q8NHU2 BCAR1-209ENST00000546196 1340 ntBASIC16.44■□□□□ 0.22
CFAP61Q8NHU2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFAP61Q8NHU2 AL671710.1-201ENST00000610245 2349 ntBASIC16.44■□□□□ 0.22
CFAP61Q8NHU2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AC087641.1-201ENST00000557561 1021 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AC096734.2-201ENST00000562054 433 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AC004877.2-201ENST00000623941 599 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 AP001350.2-201ENST00000625104 1094 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 LINC00895-201ENST00000629028 1637 ntBASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFAP61Q8NHU2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 MIR574-201ENST00000385209 96 ntBASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 AL591424.1-201ENST00000442569 1213 ntBASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 MIR4492-201ENST00000581627 80 ntBASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 AC007064.4-201ENST00000637740 555 ntBASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.42■□□□□ 0.22
CFAP61Q8NHU2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms