Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AC018845.2-201ENST00000568326 409 ntBASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AL121894.2-201ENST00000602977 491 ntBASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AL078644.1-201ENST00000609881 752 ntBASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 FAM197Y3-203ENST00000618346 717 ntBASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AL592424.1-201ENST00000563624 1536 ntBASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CSNK2A3Q8NEV1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 AC002056.1-201ENST00000395613 760 ntBASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 MED15P5-201ENST00000423150 992 ntBASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 PDPK2P-202ENST00000562415 1191 ntBASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 AC106730.1-201ENST00000566722 1090 ntBASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 DBET-201ENST00000630918 3363 ntBASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK2A3Q8NEV1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 AL603832.2-201ENST00000566195 2125 ntBASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 AC026396.1-201ENST00000419388 421 ntBASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 KRT18P2-201ENST00000447938 1258 ntBASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 KRT18P3-201ENST00000451602 1288 ntBASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 AC112191.1-201ENST00000523689 701 ntBASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.12□□□□□ -0.15
CSNK2A3Q8NEV1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms