Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC50Q8IVM0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 PMS2P4-201ENST00000412466 1052 ntBASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 VN2R19P-201ENST00000442399 1052 ntBASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 UNC93B6-202ENST00000528242 690 ntBASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 AC116407.3-201ENST00000623905 1129 ntBASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC50Q8IVM0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 MIR648-201ENST00000385046 94 ntBASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC50Q8IVM0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms