Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 ANKRD19P-201ENST00000338192 862 ntBASIC17.1■□□□□ 0.33
RNF135Q8IUD6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 BOLA2P3-201ENST00000404566 256 ntBASIC17.1■□□□□ 0.33
RNF135Q8IUD6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 CROCCP4-201ENST00000457096 498 ntBASIC17.1■□□□□ 0.33
RNF135Q8IUD6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 MPDU1-223ENST00000582151 728 ntBASIC17.1■□□□□ 0.33
RNF135Q8IUD6 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AL645728.1-201ENST00000366221 2101 ntBASIC17.09■□□□□ 0.33
RNF135Q8IUD6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 MIR1908-201ENST00000410394 80 ntBASIC17.09■□□□□ 0.33
RNF135Q8IUD6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AL512361.1-201ENST00000554200 418 ntBASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 AC131009.4-201ENST00000624048 1740 ntBASIC17.09■□□□□ 0.33
RNF135Q8IUD6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF135Q8IUD6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 AL118508.1-201ENST00000613502 2345 ntBASIC17.08■□□□□ 0.33
RNF135Q8IUD6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RNF135Q8IUD6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 TUBB8P12-201ENST00000308911 1335 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 TUBB7P-202ENST00000428444 1305 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 TUBB8P7-204ENST00000567960 1332 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 MEP1AP4-201ENST00000423244 1087 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 AC114501.2-201ENST00000439631 535 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms