Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC245100.5-201ENST00000452108 331 ntBASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 ELK1P1-201ENST00000485699 580 ntBASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 CTBP2P3-201ENST00000585629 1255 ntBASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC62Q6P9F0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 MYCLP2-201ENST00000449268 967 ntBASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 AL008721.1-201ENST00000609964 604 ntBASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC62Q6P9F0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 AC123567.1-201ENST00000548294 1261 ntBASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 RRP7BP-205ENST00000566851 833 ntBASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC62Q6P9F0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms