Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 POLL-217ENST00000628479 1953 ntTSL 5 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 HSPB1P2-201ENST00000448722 546 ntBASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 AC080080.1-201ENST00000625121 2420 ntBASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CDC42BPAQ5VT25 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 ACKR1-201ENST00000368121 1240 ntBASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 KRT8P13-201ENST00000463294 1010 ntBASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 KRT18P25-201ENST00000508931 1278 ntBASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 PPA1-206ENST00000625364 644 ntTSL 5 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 AGGF1P2-201ENST00000426656 2106 ntBASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPAQ5VT25 AL591846.1-201ENST00000451736 433 ntBASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 MIR4741-201ENST00000579822 90 ntBASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AL096828.3-201ENST00000615354 462 ntBASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPAQ5VT25 AC018735.1-201ENST00000437208 1502 ntBASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 EEF1DP1-201ENST00000585891 896 ntBASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.83■■□□□ 1.41
CDC42BPAQ5VT25 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 KRT8P35-201ENST00000483942 1338 ntBASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 AC011676.5-201ENST00000624864 2660 ntBASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDC42BPAQ5VT25 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms