Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 LAGE3P1-201ENST00000425356 484 ntBASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 FGFR3P6-201ENST00000457012 610 ntBASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SCARNA2-201ENST00000458748 420 ntBASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 FOSL1P1-201ENST00000511041 816 ntBASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC090616.6-203ENST00000579186 1945 ntBASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 AC105250.1-201ENST00000509378 2057 ntBASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC00242Q5T6M2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 TCAF2P1-201ENST00000291129 2421 ntBASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 CICP24-201ENST00000605464 2705 ntBASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00242Q5T6M2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms