Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE1AP54750 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 KRT18P13-201ENST00000400056 1290 ntBASIC19.65■□□□□ 0.74
PDE1AP54750 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 CNN2P11-201ENST00000429351 262 ntBASIC19.65■□□□□ 0.74
PDE1AP54750 AC004967.1-201ENST00000453589 447 ntBASIC19.65■□□□□ 0.74
PDE1AP54750 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE1AP54750 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE1AP54750 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE1AP54750 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
PDE1AP54750 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDE1AP54750 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.64■□□□□ 0.74
PDE1AP54750 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDE1AP54750 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDE1AP54750 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 CICP13-201ENST00000422015 2789 ntBASIC19.64■□□□□ 0.73
PDE1AP54750 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDE1AP54750 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.64■□□□□ 0.73
PDE1AP54750 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.64■□□□□ 0.73
PDE1AP54750 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.64■□□□□ 0.73
PDE1AP54750 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDE1AP54750 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.64■□□□□ 0.73
PDE1AP54750 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.64■□□□□ 0.73
PDE1AP54750 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.64■□□□□ 0.73
PDE1AP54750 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE1AP54750 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PDE1AP54750 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
PDE1AP54750 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDE1AP54750 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE1AP54750 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE1AP54750 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE1AP54750 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDE1AP54750 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE1AP54750 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.63■□□□□ 0.73
PDE1AP54750 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 AC105021.1-202ENST00000570572 669 ntBASIC19.63■□□□□ 0.73
PDE1AP54750 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.63■□□□□ 0.73
PDE1AP54750 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PDE1AP54750 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDE1AP54750 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 AL139384.1-201ENST00000612143 3047 ntBASIC19.63■□□□□ 0.73
PDE1AP54750 AC092850.2-201ENST00000623821 2697 ntBASIC19.63■□□□□ 0.73
PDE1AP54750 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE1AP54750 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.62■□□□□ 0.73
PDE1AP54750 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDE1AP54750 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.62■□□□□ 0.73
PDE1AP54750 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PDE1AP54750 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE1AP54750 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE1AP54750 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE1AP54750 DNAJB3-202ENST00000449667 1266 ntBASIC19.62■□□□□ 0.73
PDE1AP54750 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.62■□□□□ 0.73
PDE1AP54750 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE1AP54750 MIR4313-201ENST00000580760 101 ntBASIC19.62■□□□□ 0.73
PDE1AP54750 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE1AP54750 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.62■□□□□ 0.73
PDE1AP54750 AC026979.3-201ENST00000607315 403 ntBASIC19.62■□□□□ 0.73
PDE1AP54750 AC023511.2-201ENST00000618803 211 ntBASIC19.62■□□□□ 0.73
PDE1AP54750 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PDE1AP54750 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE1AP54750 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE1AP54750 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE1AP54750 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms