Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCFC1P51610 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCFC1P51610 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.96□□□□□ -0.17
HCFC1P51610 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.96□□□□□ -0.17
HCFC1P51610 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.96□□□□□ -0.17
HCFC1P51610 AL022328.1-201ENST00000610050 478 ntBASIC13.96□□□□□ -0.17
HCFC1P51610 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.96□□□□□ -0.17
HCFC1P51610 CU634019.7-201ENST00000624153 1185 ntBASIC13.96□□□□□ -0.17
HCFC1P51610 FP236241.2-201ENST00000624906 1185 ntBASIC13.96□□□□□ -0.17
HCFC1P51610 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HCFC1P51610 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCFC1P51610 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCFC1P51610 AL391256.1-201ENST00000443260 1855 ntBASIC13.96□□□□□ -0.18
HCFC1P51610 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
HCFC1P51610 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HCFC1P51610 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HCFC1P51610 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HCFC1P51610 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
HCFC1P51610 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HCFC1P51610 PCDH8P1-201ENST00000428983 2773 ntBASIC13.96□□□□□ -0.18
HCFC1P51610 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HCFC1P51610 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HCFC1P51610 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC078925.2-201ENST00000624013 1973 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.95□□□□□ -0.18
HCFC1P51610 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC068587.3-201ENST00000526613 355 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.95□□□□□ -0.18
HCFC1P51610 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 GPR182-203ENST00000622922 591 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 TUBB1P2-201ENST00000422712 1306 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 TUBB1P1-201ENST00000503144 1300 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC099548.2-209ENST00000480264 625 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.95□□□□□ -0.18
HCFC1P51610 PTP4A1P2-201ENST00000546033 454 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.95□□□□□ -0.18
HCFC1P51610 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 AC133539.2-201ENST00000604757 467 ntBASIC13.95□□□□□ -0.18
HCFC1P51610 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HCFC1P51610 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCFC1P51610 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.95□□□□□ -0.18
HCFC1P51610 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HCFC1P51610 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
HCFC1P51610 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCFC1P51610 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HCFC1P51610 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.94□□□□□ -0.18
HCFC1P51610 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.94□□□□□ -0.18
HCFC1P51610 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.94□□□□□ -0.18
HCFC1P51610 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms