Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSNK1EP49674 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSNK1EP49674 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSNK1EP49674 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
CSNK1EP49674 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CSNK1EP49674 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CSNK1EP49674 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSNK1EP49674 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSNK1EP49674 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CSNK1EP49674 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSNK1EP49674 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.72■□□□□ 0.11
CSNK1EP49674 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CSNK1EP49674 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.72■□□□□ 0.11
CSNK1EP49674 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.71■□□□□ 0.11
CSNK1EP49674 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CSNK1EP49674 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.71■□□□□ 0.11
CSNK1EP49674 TARDBPP1-201ENST00000442013 1203 ntBASIC15.71■□□□□ 0.11
CSNK1EP49674 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 CTBP2P5-201ENST00000454986 1264 ntBASIC15.71■□□□□ 0.11
CSNK1EP49674 POU5F1P6-201ENST00000466990 990 ntBASIC15.71■□□□□ 0.11
CSNK1EP49674 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 TDH-203ENST00000531764 1110 ntBASIC15.71■□□□□ 0.11
CSNK1EP49674 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.71■□□□□ 0.11
CSNK1EP49674 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.71■□□□□ 0.11
CSNK1EP49674 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.71■□□□□ 0.11
CSNK1EP49674 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.71■□□□□ 0.11
CSNK1EP49674 PDIA3P1-201ENST00000471856 1510 ntBASIC15.71■□□□□ 0.11
CSNK1EP49674 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CSNK1EP49674 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.71■□□□□ 0.11
CSNK1EP49674 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSNK1EP49674 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.71■□□□□ 0.1
CSNK1EP49674 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.71■□□□□ 0.1
CSNK1EP49674 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1EP49674 AC012313.1-201ENST00000593393 3059 ntBASIC15.71■□□□□ 0.1
CSNK1EP49674 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1EP49674 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CSNK1EP49674 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSNK1EP49674 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 AC099398.1-201ENST00000567919 2776 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 AL592424.1-201ENST00000563624 1536 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1EP49674 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 AC074338.1-201ENST00000416825 156 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 ACTG1P3-201ENST00000431775 1114 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 KLF2P4-201ENST00000451959 1225 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 FAM86LP-201ENST00000478302 853 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.7■□□□□ 0.1
CSNK1EP49674 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 AL359711.2-201ENST00000563105 872 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 MIR4538-201ENST00000581377 78 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.7■□□□□ 0.1
CSNK1EP49674 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.7■□□□□ 0.1
CSNK1EP49674 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.7■□□□□ 0.1
CSNK1EP49674 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CSNK1EP49674 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.7■□□□□ 0.1
CSNK1EP49674 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSNK1EP49674 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms