Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 KRT18P2-201ENST00000447938 1258 ntBASIC14.24□□□□□ -0.13
CX3CR1P49238 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
CX3CR1P49238 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CR1P49238 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CR1P49238 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 AC068137.2-201ENST00000605408 478 ntBASIC14.24□□□□□ -0.13
CX3CR1P49238 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CR1P49238 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CR1P49238 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 ZNF259P1-201ENST00000407656 1365 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 AP005117.1-202ENST00000581724 1908 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CX3CR1P49238 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.23□□□□□ -0.13
CX3CR1P49238 AL590627.1-203ENST00000421194 1026 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.23□□□□□ -0.13
CX3CR1P49238 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CX3CR1P49238 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 AL161645.1-201ENST00000622716 1255 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 AC073439.1-201ENST00000624121 1774 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 PRAL-201ENST00000624952 3286 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CX3CR1P49238 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 WASH6P-202ENST00000359512 1437 ntBASIC14.23□□□□□ -0.13
CX3CR1P49238 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CR1P49238 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CX3CR1P49238 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CR1P49238 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CR1P49238 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CR1P49238 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CR1P49238 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CR1P49238 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CR1P49238 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CX3CR1P49238 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CR1P49238 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CX3CR1P49238 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms