Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC1P35251 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFC1P35251 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 RPSAP43-201ENST00000402237 625 ntBASIC17.03■□□□□ 0.32
RFC1P35251 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC1P35251 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC1P35251 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC1P35251 AC069335.1-201ENST00000489972 472 ntBASIC17.03■□□□□ 0.32
RFC1P35251 MIR4469-201ENST00000583919 79 ntBASIC17.03■□□□□ 0.32
RFC1P35251 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC1P35251 AC105339.1-204ENST00000636249 355 ntBASIC17.03■□□□□ 0.32
RFC1P35251 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC1P35251 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC1P35251 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RFC1P35251 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFC1P35251 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFC1P35251 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFC1P35251 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFC1P35251 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 HAUS4P1-201ENST00000406739 1145 ntBASIC17.02■□□□□ 0.32
RFC1P35251 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 BX842568.4-201ENST00000421222 227 ntBASIC17.02■□□□□ 0.32
RFC1P35251 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 AL592309.1-201ENST00000443127 649 ntBASIC17.02■□□□□ 0.32
RFC1P35251 AC245100.5-201ENST00000452108 331 ntBASIC17.02■□□□□ 0.32
RFC1P35251 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.02■□□□□ 0.32
RFC1P35251 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC1P35251 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC1P35251 KRT8P23-201ENST00000560090 1207 ntBASIC17.02■□□□□ 0.32
RFC1P35251 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 AC061975.2-201ENST00000581722 295 ntBASIC17.02■□□□□ 0.32
RFC1P35251 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC1P35251 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC1P35251 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC1P35251 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC1P35251 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RFC1P35251 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.02■□□□□ 0.31
RFC1P35251 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC1P35251 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms